CDS

Accession Number TCMCG016C26183
gbkey CDS
Protein Id OMO54637.1
Location complement(join(9018..9141,9220..9311,9631..9747,9826..9871,10022..10086,10241..10306,10643..10723,10838..10950,11409..11577,11718..11795,12071..12193,12849..12989,13206..13396,13527..13648,14227..14350,14750..14813))
Organism Corchorus capsularis
locus_tag CCACVL1_27704

Protein

Length 571aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014903.1
Definition hypothetical protein CCACVL1_27704 [Corchorus capsularis]
Locus_tag CCACVL1_27704

EGGNOG-MAPPER Annotation

COG_category A
Description ATP-dependent RNA helicase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K17675        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000177        [VIEW IN EMBL-EBI]
GO:0000178        [VIEW IN EMBL-EBI]
GO:0000957        [VIEW IN EMBL-EBI]
GO:0000958        [VIEW IN EMBL-EBI]
GO:0000959        [VIEW IN EMBL-EBI]
GO:0000960        [VIEW IN EMBL-EBI]
GO:0000962        [VIEW IN EMBL-EBI]
GO:0000963        [VIEW IN EMBL-EBI]
GO:0000965        [VIEW IN EMBL-EBI]
GO:0001558        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003678        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003725        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006401        [VIEW IN EMBL-EBI]
GO:0006402        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009553        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009561        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009937        [VIEW IN EMBL-EBI]
GO:0009939        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009967        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010647        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0010929        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023056        [VIEW IN EMBL-EBI]
GO:0030307        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0032392        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032508        [VIEW IN EMBL-EBI]
GO:0032989        [VIEW IN EMBL-EBI]
GO:0032990        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034458        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0035945        [VIEW IN EMBL-EBI]
GO:0035946        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043066        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043069        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043954        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045025        [VIEW IN EMBL-EBI]
GO:0045927        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0047484        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048584        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051254        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060548        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0070584        [VIEW IN EMBL-EBI]
GO:0070827        [VIEW IN EMBL-EBI]
GO:0071025        [VIEW IN EMBL-EBI]
GO:0071026        [VIEW IN EMBL-EBI]
GO:0071103        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080036        [VIEW IN EMBL-EBI]
GO:0080038        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0080134        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0140053        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901000        [VIEW IN EMBL-EBI]
GO:1901002        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1902584        [VIEW IN EMBL-EBI]
GO:1905354        [VIEW IN EMBL-EBI]
GO:2000070        [VIEW IN EMBL-EBI]
GO:2000827        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTCTATACTTCTTCGCCAACGAAGAGTTTCAGCTTTGGGTGTTTCGCGAATTCTTCAAGATAATGGTGATTCTTTAAGACTACAAATGGAATCAAAGTTCGGGACATTTTCAAGCATAGGTGTTATGATAAGGAAGTATAGCAGTGGAAGGGATCCTGCAAAGTTTGATTTCACCGATCTCACATGTCCCCATACATGGTATCCAAATGCTCGAAAAAAGAATCGGAAGGTTTTCTTGCATGTTGGTCCCACAAACAGTGGTAAAACATACCATGCTCTGAAGCGACTTCAATCAAGTGCTTCTGGTATATATTGTGGCCCTTTAAGATTATTGGCATGGGAAGTGTCAAAACGGTTGAACAAGGCCAAAGTTCCCTGTGATCTAATTACAGGACAAGAGAAGGTGGAAGTGGAAGGTGCAAAGCACAAAGCTGTAACAGTTGAGATGGCTGATGTAAATGCTGATTACCATTGTGCTATTGTTGACGAAATACAGATGTTGGGATGTAAGACTAGAGGTTTTTCATTCACCCGTGCCTTGTTGGGAATTGCTGCTGATGAACTTCATCTTTGTGGGGACGCTGCTGCTGTTCCTCTTATTCAGGAATTATTACAAGTGACTGGAGATGATGTCCAGGTCCAAACTTATGAGAGACTTTCACCACTAGTCCCCCTGGAAGTTCCTCTTGGATCTTTTTCTAACATACGAACGGGTGACTGTCTTGTAACCTTTTCTCGTAAGGGAATATACGGATTGAAGAAAAAAATTGAACATGGGGGAAAGCATCTTTGCTCTGTGGTTTATGGTTCATTGCCACCAGAGACTCGTACAAGACAGGCAACAAGGTTTAATGATGAAAGCAGTGAGTTTGATGTGCTTGTGGCCAGTGATGCAATTGGGATGGGTCTTAATCTGAATATTTCAAGAATAATATTTTCAACATTGAGGAAGTTCGATGGTTTTGAAAGGAGGGATCTTACAGTATCAGAGATCAAGCAAATTGCAGGGAGAGCTGGAAGGTATGGATCAAAATTTCCTGAGGGACAAGTAACCTGTTTAGATGCTGATGATCTACCTTTGCTTCATTCATCATTGAAATCACCCTCTCCTATTTTAGAGCAAGCTGGACTATTTCCATCTTTTGATCTCATGTTTATGTATTCAAGATTACAACCAAAAAAAGGTCTCTACCAGATATTGGAGCATTTTCTAGAGAATGCAAAACTATCTGAGAATTATTTCATTTCAAACTGTGAAGAGCTGTTGAAAGTTGCTTCTGTTGTTGATCAACTGCCTCTAGGGTTGCAAGATAAGTATCTTTTCTGCATCAGTCCGGTGGACATGGATGATGAAATTTCATCCCAGGGTCTAGTACAGTTTGCTGAGAATTATTCAAAGAAAGGCCTTGTTCGCCTTCGAGAGATATTTACTCCTGGTACGCTTCAGGTGCCAAAAACACATCCTGCACTCAAGGAGCTTGAATCCATTCATAAGGTATTAGAACTCTACGTTTGGTTGAGTTTTCGGTTGGAGGAATCGTTCCCTGACCATGAGCTGGCTTCTTCACAGAAGGCCATCTGTAGTATGTTAATCGAGGAATTCCTTGAAAGATTTGGTGGACAAAGGCCAAGATCGAGAAAAAAGCTAACTTCCCGCCCAAGCCTTGATTCTTTAATTGCAAAAAGGAAAAGAGAATATCTATATGATTAA
Protein:  
MASILLRQRRVSALGVSRILQDNGDSLRLQMESKFGTFSSIGVMIRKYSSGRDPAKFDFTDLTCPHTWYPNARKKNRKVFLHVGPTNSGKTYHALKRLQSSASGIYCGPLRLLAWEVSKRLNKAKVPCDLITGQEKVEVEGAKHKAVTVEMADVNADYHCAIVDEIQMLGCKTRGFSFTRALLGIAADELHLCGDAAAVPLIQELLQVTGDDVQVQTYERLSPLVPLEVPLGSFSNIRTGDCLVTFSRKGIYGLKKKIEHGGKHLCSVVYGSLPPETRTRQATRFNDESSEFDVLVASDAIGMGLNLNISRIIFSTLRKFDGFERRDLTVSEIKQIAGRAGRYGSKFPEGQVTCLDADDLPLLHSSLKSPSPILEQAGLFPSFDLMFMYSRLQPKKGLYQILEHFLENAKLSENYFISNCEELLKVASVVDQLPLGLQDKYLFCISPVDMDDEISSQGLVQFAENYSKKGLVRLREIFTPGTLQVPKTHPALKELESIHKVLELYVWLSFRLEESFPDHELASSQKAICSMLIEEFLERFGGQRPRSRKKLTSRPSLDSLIAKRKREYLYD